Package jline.lib.butools.fitting

Class LikelihoodFromTrace

java.lang.Object

jline.lib.butools.fitting.LikelihoodFromTrace

public final class LikelihoodFromTrace
extends Object

Method Summary

Modifier and Type	Method	Description
static double	likelihoodFromTraceMAP(double[] trace, Matrix D0, Matrix D1)
static double	likelihoodFromTraceMAP(double[] trace, Matrix D0, Matrix D1, double prec)	Evaluates the log-likelihood of a trace with the given MAP.
static double	likelihoodFromTracePH(double[] trace, Matrix alpha, Matrix A)
static double	likelihoodFromTracePH(double[] trace, Matrix alpha, Matrix A, double prec)	Evaluates the log-likelihood of a trace with the given PH distribution.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

likelihoodFromTracePH

public static double likelihoodFromTracePH(double[] trace,
 Matrix alpha,
 Matrix A,
 double prec)

Evaluates the log-likelihood of a trace with the given PH distribution. The result is divided by the length of the trace.

likelihoodFromTracePH

public static double likelihoodFromTracePH(double[] trace,
 Matrix alpha,
 Matrix A)

likelihoodFromTraceMAP

public static double likelihoodFromTraceMAP(double[] trace,
 Matrix D0,
 Matrix D1,
 double prec)

Evaluates the log-likelihood of a trace with the given MAP. The result is divided by the length of the trace.

likelihoodFromTraceMAP

public static double likelihoodFromTraceMAP(double[] trace,
 Matrix D0,
 Matrix D1)